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wikademia>AndrewGNF
m remove obsolete Hs_expression and Mm_expression fields
wikademia>Wikademia
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<noinclude>
<noinclude>{{pp-template|small=yes}}
{| id="drugInfoBox" style="float: right; clear: right; margin: 0 0 0.5em 1em; background: #ffffff;" class="toccolours" border=0 cellpadding=2 align=right width="280px"
{| id="drugInfoBox" style="float: right; clear: right; margin: 0 0 0.5em 1em; background: #ffffff;" class="toccolours" border=0 cellpadding=2 align=right width="280px"
| align="center" colspan="3" bgcolor="#dddddd" | '''Orthologs'''  
| align="center" colspan="3" bgcolor="#dddddd" | '''[[Homology (biology)#Orthology|Orthologs]]'''  
|-
|-
</noinclude>
</noinclude>
|
|
| bgcolor="#e7dcc3" | Human
| bgcolor="#C3FDB8" | Human
| bgcolor="#e7dcc3" | Mouse
| bgcolor="#C3FDB8" | Mouse
<!--
{{#if:
  {{ #if: Human | | }}
  {{ #if: Mouse | | }}
  | something
  | nothing
}}
-->
{{ #if:
  {{ #if: {{{Hs_EntrezGene|}}} |x | }}
  {{ #if: {{{Mm_EntrezGene|}}} |x | }}
  | {{!}}-
    {{!}} bgcolor="#C3FDB8" {{!}} [[Entrez]]
    {{ #if: {{{Hs_EntrezGene|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&amp;cmd=retrieve&amp;dopt=default&amp;list_uids={{{Hs_EntrezGene}}}&rn=1 {{{Hs_EntrezGene}}}]</span>
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
    {{ #if: {{{Mm_EntrezGene|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&amp;cmd=retrieve&amp;dopt=default&amp;list_uids={{{Mm_EntrezGene}}}&rn=1 {{{Mm_EntrezGene}}}]</span>
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
  |}}
 
{{ #if:
  {{ #if: {{{Hs_Ensembl|}}} |x | }}
  {{ #if: {{{Mm_Ensembl|}}} |x | }}
  | {{!}}-
      {{!}} bgcolor="#C3FDB8" {{!}} [[Ensembl]]
      {{ #if: {{{Hs_Ensembl|}}}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks><small><small>[http://www.ensembl.org/Homo_sapiens/geneview?gene={{{Hs_Ensembl}}};db=core {{{Hs_Ensembl}}}]</small></small></span>
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
      {{ #if: {{{Mm_Ensembl|}}}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks><small><small>[http://www.ensembl.org/Mus_musculus/geneview?gene={{{Mm_Ensembl}}};db=core {{{Mm_Ensembl}}}]</small></small></span>
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
  |}}
{{ #if:
  {{ #if: {{{Hs_Uniprot|}}} |x | }}
  {{ #if: {{{Mm_Uniprot|}}} |x | }}
  | {{!}}-
    {{!}} bgcolor="#C3FDB8" {{!}} [[Uniprot]]
    {{ #if: {{{Hs_Uniprot|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} {{Uniprot|{{{Hs_Uniprot}}}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
    {{ #if: {{{Mm_Uniprot|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} {{Uniprot|{{{Mm_Uniprot}}}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
  |}}
{{ #if:
  {{#if: {{{Hs_RefseqmRNA|}}} |x | }}
  {{#if: {{{Hs_RefseqProtein|}}} |x | }}
  {{#if: {{{Mm_RefseqmRNA|}}} |x | }}
  {{#if: {{{Mm_RefseqProtein|}}} |x | }}
  | {{!}}-
    {{!}} bgcolor="#C3FDB8" {{!}} Refseq
<!-- I apologize to whomever may be trying to sort through these next two lines... it seems that putting a newline character was causing serious formatting issues.  Only after all of the newline characters were removed did the results look correct. -->
    {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} <span class=plainlinks>{{ #if: {{{Hs_RefseqmRNA|}}}| [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqmRNA}}} {{{Hs_RefseqmRNA}}}]| n/a }} <small>(mRNA)</small><br> {{ #if: {{{Hs_RefseqProtein|}}}|[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqProtein}}} {{{Hs_RefseqProtein}}}]| n/a }} <small>(protein)</small> </span>
    {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}<span class=plainlinks>{{ #if: {{{Mm_RefseqmRNA|}}}| [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqmRNA}}} {{{Mm_RefseqmRNA}}}] | n/a }} <small>(mRNA)</small><br> {{ #if: {{{Mm_RefseqProtein|}}}| [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqProtein}}} {{{Mm_RefseqProtein}}}]| n/a }} <small>(protein)</small></span>
  | }}
<!--  this is a repeat of the above two lines, but in a much more reader friendly format.
 
    {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
    <span class=plainlinks>
    {{ #if: {{{Hs_RefseqmRNA|}}}
        | [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqmRNA}}} {{{Hs_RefseqmRNA}}}]
        | n/a }}
    <small>(mRNA)</small><br>
    {{ #if: {{{Hs_RefseqProtein|}}}
        | [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqProtein}}} {{{Hs_RefseqProtein}}}]
        | n/a }}
    <small>(protein)</small>
    </span>
    {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
    <span class=plainlinks>
    {{ #if: {{{Mm_RefseqmRNA|}}}
        | [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqmRNA}}} {{{Mm_RefseqmRNA}}}]
        | n/a }}
    <small>(mRNA)</small><br>
    {{ #if: {{{Mm_RefseqProtein|}}}
        | [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqProtein}}} {{{Mm_RefseqProtein}}}]
        | n/a }}
    <small>(protein)</small>
    </span>
-->
{{ #if:
  {{#if: {{{Hs_GenLoc_chr|}}} |x | }}
  {{#if: {{{Hs_GenLoc_start|}}} |x | }}
  {{#if: {{{Hs_GenLoc_end|}}} |x | }}
  {{#if: {{{Mm_GenLoc_chr|}}} |x | }}
  {{#if: {{{Mm_GenLoc_start|}}} |x | }}
  {{#if: {{{Mm_GenLoc_end|}}} |x | }}
  | {{!}}-
    {{!}} bgcolor="#C3FDB8" {{!}} Location
<!-- reader friendly version
    {{#if: {{{Hs_GenLoc_chr|}}}
      | {{#if: {{{Hs_GenLoc_start|}}}
          | {{#if: {{{Hs_GenLoc_end|}}}
              | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}}
                <span class=plainlinks>
                [http://genome.ucsc.edu/cgi-bin/hgTracks?org=Human{{ #if: {{{Hs_GenLoc_db}}} |?db={{{Hs_GenLoc_db}}}|}}
                &position=chr{{{Hs_GenLoc_chr}}}:{{{Hs_GenLoc_start}}}-{{{Hs_GenLoc_end}}}
                Chr {{{Hs_GenLoc_chr}}}:
                {{#expr: {{{Hs_GenLoc_start}}} / 1000000 round 2}} -
                {{#expr: {{{Hs_GenLoc_end}}} / 1000000 round 2}} Mb]
                </span>
                |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
            |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
-->
    {{#if: {{{Hs_GenLoc_chr|}}}
      | {{#if: {{{Hs_GenLoc_start|}}}
          | {{#if: {{{Hs_GenLoc_end|}}}
              | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks> [http://genome.ucsc.edu/cgi-bin/hgTracks?org=Human{{ #if: {{{Hs_GenLoc_db}}} |?db={{{Hs_GenLoc_db}}}|}}&position=chr{{{Hs_GenLoc_chr}}}:{{{Hs_GenLoc_start}}}-{{{Hs_GenLoc_end}}} Chr {{{Hs_GenLoc_chr}}}: {{#expr: {{{Hs_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Hs_GenLoc_end}}} / 1000000 round 2}} Mb] </span>
                |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
            |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
<!-- reader friendly version:
    {{#if: {{{Mm_GenLoc_chr|}}}
      | {{#if: {{{Mm_GenLoc_start|}}}
          | {{#if: {{{Mm_GenLoc_end|}}}
              | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}}
                <span class=plainlinks>
                [http://genome.ucsc.edu/cgi-bin/hgTracks?org=Mouse{{ #if: {{{Mm_GenLoc_db}}} |?db={{{Mm_GenLoc_db}}}|}}
                &position=chr{{{Mm_GenLoc_chr}}}:{{{Mm_GenLoc_start}}}-{{{Mm_GenLoc_end}}}
                Chr {{{Mm_GenLoc_chr}}}:
                {{#expr: {{{Mm_GenLoc_start}}} / 1000000 round 2}} -
                {{#expr: {{{Mm_GenLoc_end}}} / 1000000 round 2}} Mb]
                </span>
                |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
            |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
-->
    {{#if: {{{Mm_GenLoc_chr|}}}
      | {{#if: {{{Mm_GenLoc_start|}}}
          | {{#if: {{{Mm_GenLoc_end|}}}
              | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks> [http://genome.ucsc.edu/cgi-bin/hgTracks?org=Mouse{{ #if: {{{Mm_GenLoc_db}}} |?db={{{Mm_GenLoc_db}}}|}}&position=chr{{{Mm_GenLoc_chr}}}:{{{Mm_GenLoc_start}}}-{{{Mm_GenLoc_end}}} Chr {{{Mm_GenLoc_chr}}}: {{#expr: {{{Mm_GenLoc_start}}} / 1000000 round 2}} -  {{#expr: {{{Mm_GenLoc_end}}} / 1000000 round 2}} Mb] </span>
                |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
            |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
        |{{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
  |}}
|-
|-
| bgcolor="#e7dcc3" | [[Entrez]]
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&amp;cmd=retrieve&amp;dopt=default&amp;list_uids={{{Hs_EntrezGene}}}&rn=1 {{{Hs_EntrezGene}}}]</span>
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=gene&amp;cmd=retrieve&amp;dopt=default&amp;list_uids={{{Mm_EntrezGene}}}&rn=1 {{{Mm_EntrezGene}}}]</span>
|-
| bgcolor="#e7dcc3" | [[Ensembl]]
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks><small><small>[http://www.ensembl.org/Homo_sapiens/geneview?gene={{{Hs_Ensembl}}};db=core {{{Hs_Ensembl}}}]</small></small></span>
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks><small><small>[http://www.ensembl.org/Mus_musculus/geneview?gene={{{Mm_Ensembl}}};db=core {{{Mm_Ensembl}}}]</small></small></span>
|-
| bgcolor="#e7dcc3" | [[Uniprot]]
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| {{Uniprot|{{{Hs_Uniprot}}}}}
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| {{Uniprot|{{{Mm_Uniprot}}}}}
|-
| bgcolor="#e7dcc3" | Refseq
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqmRNA}}} {{{Hs_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqProtein}}} {{{Hs_RefseqProtein}}}] <small>(protein)</small></span>
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqmRNA}}} {{{Mm_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqProtein}}} {{{Mm_RefseqProtein}}}] <small>(protein)</small></span>
|-
| bgcolor="#e7dcc3" | Location
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Hs_GenLoc_db}}}&position=chr{{{Hs_GenLoc_chr}}}:{{{Hs_GenLoc_start}}}-{{{Hs_GenLoc_end}}} Chr{{{Hs_GenLoc_chr}}}: {{#expr: {{{Hs_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Hs_GenLoc_end}}} / 1000000 round 2}} Mb]</span>
| bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"| <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Mm_GenLoc_db}}}&position=chr{{{Mm_GenLoc_chr}}}:{{{Mm_GenLoc_start}}}-{{{Mm_GenLoc_end}}} Chr{{{Mm_GenLoc_chr}}}: {{#expr: {{{Mm_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Mm_GenLoc_end}}} / 1000000 round 2}} Mb]</span>
|-
<noinclude>
|}
==Usage==


'''NOTE: use only in conjunction with [[Template:GNF_Protein_box]]!'''  For example, see [[ITK (gene)]].
{{ #if:  
  {{ #if: {{{Hs_EntrezGene|}}} |x | }}
  {{ #if: {{{Mm_EntrezGene|}}} |x | }}
  | {{!}}-
    {{!}} bgcolor="#C3FDB8" {{!}} [[Pubmed]] search
    {{ #if: {{{Hs_EntrezGene|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Link&LinkName=gene_pubmed&from_uid={{{Hs_EntrezGene}}}]</span>
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
    {{ #if: {{{Mm_EntrezGene|}}}
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=Link&LinkName=gene_pubmed&from_uid={{{Mm_EntrezGene}}}]</span>
        | {{!}} bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-right:2px solid #dddddd"{{!}} n/a }}
  |}}


<pre>
<includeonly>{{#if: {{{Hs_GenLoc_chr|}}} | [[Category: Genes on chromosome {{{Hs_GenLoc_chr}}}]] }}</includeonly>
{{GNF_Ortholog_box
| Hs_EntrezGene =
| Hs_RefseqmRNA =
| Hs_RefseqProtein =
| Hs_GenLoc_db =
| Hs_GenLoc_chr =
| Hs_GenLoc_start =
| Hs_GenLoc_end =
| Hs_Uniprot =
| Mm_EntrezGene =
| Mm_RefseqmRNA =
| Mm_RefseqProtein =
| Mm_GenLoc_db =
| Mm_GenLoc_chr =
| Mm_GenLoc_start =
| Mm_GenLoc_end =
| Mm_Uniprot =
}}
</pre>


== To-do list ==
<noinclude>
*need to make each field optional
|}
 
{{Documentation}}
[[Category:Biology infobox templates|{{PAGENAME}}]]
</noinclude>
</noinclude>

Latest revision as of 05:37, 23 March 2009

Orthologs
Human Mouse




[create] Template documentation
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