Template:GNF Ortholog box: Difference between revisions
wikademia>David D. add noinclude headers so can see the appearance of the ortholog box |
wikademia>David D. experiment with tabulation, might be easier to quickly assess the information in the table. |
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| bgcolor="#e7dcc3" | [[Ensembl]] | | bgcolor="#e7dcc3" | [[Ensembl]] | ||
| bgcolor="#eeeeee" | <span class=plainlinks><small><small>[http://www.ensembl.org/Homo_sapiens/geneview?gene={{{Hs_Ensembl}}};db=core {{{Hs_Ensembl}}}]</small></small></span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks><small><small>[http://www.ensembl.org/Homo_sapiens/geneview?gene={{{Hs_Ensembl}}};db=core {{{Hs_Ensembl}}}]</small></small></span> | ||
| bgcolor="#eeeeee" | <span class=plainlinks><small><small>[http://www.ensembl.org/Mus_musculus/geneview?gene={{{Mm_Ensembl}}};db=core {{{Mm_Ensembl}}}]</small></small></span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks><small><small>[http://www.ensembl.org/Mus_musculus/geneview?gene={{{Mm_Ensembl}}};db=core {{{Mm_Ensembl}}}]</small></small></span> | ||
|- | |- | ||
| bgcolor="#e7dcc3" | [[Uniprot]] | | bgcolor="#e7dcc3" | [[Uniprot]] | ||
| bgcolor="#eeeeee" | {{Uniprot|{{{Hs_Uniprot}}}}} | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| {{Uniprot|{{{Hs_Uniprot}}}}} | ||
| bgcolor="#eeeeee" | {{Uniprot|{{{Mm_Uniprot}}}}} | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| {{Uniprot|{{{Mm_Uniprot}}}}} | ||
|- | |- | ||
| bgcolor="#e7dcc3" | Refseq | | bgcolor="#e7dcc3" | Refseq | ||
| bgcolor="#eeeeee" | <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqmRNA}}} {{{Hs_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqProtein}}} {{{Hs_RefseqProtein}}}] <small>(protein)</small></span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqmRNA}}} {{{Hs_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Hs_RefseqProtein}}} {{{Hs_RefseqProtein}}}] <small>(protein)</small></span> | ||
| bgcolor="#eeeeee" | <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqmRNA}}} {{{Mm_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqProtein}}} {{{Mm_RefseqProtein}}}] <small>(protein)</small></span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqmRNA}}} {{{Mm_RefseqmRNA}}}] <small>(mRNA)</small><br>[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val={{{Mm_RefseqProtein}}} {{{Mm_RefseqProtein}}}] <small>(protein)</small></span> | ||
|- | |- | ||
| bgcolor="#e7dcc3" | Location | | bgcolor="#e7dcc3" | Location | ||
| bgcolor="#eeeeee" | <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Hs_GenLoc_db}}}&position=chr{{{Hs_GenLoc_chr}}}:{{{Hs_GenLoc_start}}}-{{{Hs_GenLoc_end}}} Chr{{{Hs_GenLoc_chr}}}: {{#expr: {{{Hs_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Hs_GenLoc_end}}} / 1000000 round 2}} Mb]</span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Hs_GenLoc_db}}}&position=chr{{{Hs_GenLoc_chr}}}:{{{Hs_GenLoc_start}}}-{{{Hs_GenLoc_end}}} Chr{{{Hs_GenLoc_chr}}}: {{#expr: {{{Hs_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Hs_GenLoc_end}}} / 1000000 round 2}} Mb]</span> | ||
| bgcolor="#eeeeee" | <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Mm_GenLoc_db}}}&position=chr{{{Mm_GenLoc_chr}}}:{{{Mm_GenLoc_start}}}-{{{Mm_GenLoc_end}}} Chr{{{Mm_GenLoc_chr}}}: {{#expr: {{{Mm_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Mm_GenLoc_end}}} / 1000000 round 2}} Mb]</span> | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| <span class=plainlinks>[http://genome.ucsc.edu/cgi-bin/hgTracks?db={{{Mm_GenLoc_db}}}&position=chr{{{Mm_GenLoc_chr}}}:{{{Mm_GenLoc_start}}}-{{{Mm_GenLoc_end}}} Chr{{{Mm_GenLoc_chr}}}: {{#expr: {{{Mm_GenLoc_start}}} / 1000000 round 2}} - {{#expr: {{{Mm_GenLoc_end}}} / 1000000 round 2}} Mb]</span> | ||
|- | |- | ||
| bgcolor="#e7dcc3" rowspan=2| Gene Expression | | bgcolor="#e7dcc3" rowspan=2| Gene Expression | ||
| bgcolor="#eeeeee" | {{{Hs_expression}}} | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| {{{Hs_expression}}} | ||
| bgcolor="#eeeeee" | {{{Mm_expression}}} | | bgcolor="#eeeeee" style="border-top:2px solid #dddddd"| {{{Mm_expression}}} | ||
|- | |- | ||
| align=center colspan=2 bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-bottom:2px solid #dddddd"| <span class=plainlinks>[http://symatlas.gnf.org/SymAtlas/symquery?q={{{Hs_EntrezGene}}}+{{{Mm_EntrezGene}}} Compare all orthologs]</span> | | align=center colspan=2 bgcolor="#eeeeee" style="border-top:2px solid #dddddd; border-bottom:2px solid #dddddd"| <span class=plainlinks>[http://symatlas.gnf.org/SymAtlas/symquery?q={{{Hs_EntrezGene}}}+{{{Mm_EntrezGene}}} Compare all orthologs]</span> | ||
Revision as of 04:50, 6 April 2007
| Orthologs | ||
| Human | Mouse | |
| Entrez | {{{Hs_EntrezGene}}} | {{{Mm_EntrezGene}}} |
| Ensembl | {{{Hs_Ensembl}}} | {{{Mm_Ensembl}}} |
| Uniprot | Template:Uniprot | Template:Uniprot |
| Refseq | {{{Hs_RefseqmRNA}}} (mRNA) {{{Hs_RefseqProtein}}} (protein) |
{{{Mm_RefseqmRNA}}} (mRNA) {{{Mm_RefseqProtein}}} (protein) |
| Location | Chr{{{Hs_GenLoc_chr}}}: Expression error: Unrecognized punctuation character "{". - Expression error: Unrecognized punctuation character "{". Mb | Chr{{{Mm_GenLoc_chr}}}: Expression error: Unrecognized punctuation character "{". - Expression error: Unrecognized punctuation character "{". Mb |
| Gene Expression | {{{Hs_expression}}} | {{{Mm_expression}}} |
| Compare all orthologs | ||
Usage
NOTE: use only in conjunction with Template:GNF_Protein_box! For example, see ITK (gene).
{{GNF_Ortholog_box
| Hs_EntrezGene =
| Hs_RefseqmRNA =
| Hs_RefseqProtein =
| Hs_GenLoc_db =
| Hs_GenLoc_chr =
| Hs_GenLoc_start =
| Hs_GenLoc_end =
| Hs_expression =
| Hs_Uniprot =
| Mm_EntrezGene =
| Mm_RefseqmRNA =
| Mm_RefseqProtein =
| Mm_GenLoc_db =
| Mm_GenLoc_chr =
| Mm_GenLoc_start =
| Mm_GenLoc_end =
| Mm_expression =
| Mm_Uniprot =
}}
To-do list
- need to make each field optional